Determination of Genetic Diversity Based on RAPD molecular Marker and ParARF3 Gene Expressions in some Apricot Genotypes in Iraq

Ali S. A.  Al-Janabi; Arshad N.  Alhasnawi

doi:10.37077/25200860.2021.34.2.05

Article Details

Determination of Genetic Diversity Based on RAPD molecular Marker and ParARF3 Gene Expressions in some Apricot Genotypes in Iraq

Authors:

Ali S. A. Al-Janabi | Arshad N. Alhasnawi

Publisher:

College of Agriculture, University of Basrah, Iraq

Main Topics:

Gene expression

Journal:

Basrah Journal of Agricultural Sciences Vol.34 Issue 2, pp.60-74

Document Type:

Article

Publication Date:

1/2021

Document Language:

English

Document ID (Org No.):

2001363564

pISSN:

2520-0860

DOI:

10.37077/25200860.2021.34.2.05

Keywords:

Abstract:

 Employing DNA markers allowed determining genetic diversity and relationships amongst five apricot genotypes. In this study, two relative gene expressions pertaining to ParARF3 gene, which could be distinguished from the genotypes that were exposed to various concentrations of marine alga treatments. As per our results, screening of seven primers with the DNA of 5 apricot genotypes was done, and six primers were generated while the primer OPN–16 gave negative results. The total quantity of fragments generated by 6 primers was 80 at an average of 13.33 fragments ̸primer. The highest unique percentage band depicted in U-17 touched 23%, and the total number of polymorphic bands touched 17 fragments with the average reaching 2.83 fragments ̸primer. The number of monomorphic lied in the range of 5 to 10, with a total of 47 monomorphic. Primer M 32 yielded the highest number of monomorphic bands reaching 10. Between Zaghenia and Zinni, a maximum genetic distance value of 0.8 was reached with less similarity value of 20%. A minimum genetic distance value of 0.44721 was noted between Kaisy and Baia while the high similarity value touched 55.3%. According to the cluster tree analysis, the genotypes were generally split into two key groups: A and B. The Zinni group, which included one apricot genotype, showed genetic similarity of 20% with the other genotypes present in B group. The B group was split into two sub-clusters B1 and B2 and the genetic similarity reached 44%. The ParARF3 relative gene expression pertaining to Zinni genotypes was second as well as convergent with that of gene expression for Zaghenia genotype results. Baia and Kaisy genotypes lied in between the lowest and highest ParARF3 value gene expression exposed to Marine Alga. These outcomes showed that RAPD markers offer an effectual alternative for the plant species genetic characterisation.

Article Details

Determination of Genetic Diversity Based on RAPD molecular Marker and ParARF3 Gene Expressions in some Apricot Genotypes in Iraq

Authors:

Ali S. A. Al-Janabi | Arshad N. Alhasnawi

Publisher:

College of Agriculture, University of Basrah, Iraq

Main Topics:

Gene expression

Journal:

Basrah Journal of Agricultural Sciences Vol.34 Issue 2, pp.60-74

Document Type:

Article

Publication Date:

1/2021

Document Language:

English

Document ID (Org No.):

2001363564

pISSN:

2520-0860

DOI:

10.37077/25200860.2021.34.2.05

Plant

DNA

RAPD markers

Genetic diversity

Gene expression

Issues

Article Details

Determination of Genetic Diversity Based on RAPD molecular Marker and ParARF3 Gene Expressions in some Apricot Genotypes in Iraq

Authors: Ali S. A. Al-Janabi | Arshad N. Alhasnawi

Publisher: College of Agriculture, University of Basrah, Iraq

Main Topics: Gene expression

Journal: Basrah Journal of Agricultural Sciences Vol.34 Issue 2, pp.60-74

Document Type: Article

Publication Date: 1/2021

Document Language: English

Document ID (Org No.): 2001363564

pISSN: 2520-0860

DOI: 10.37077/25200860.2021.34.2.05

Plant

DNA

RAPD markers

Genetic diversity

Gene expression

Issues

Authors:

Ali S. A. Al-Janabi | Arshad N. Alhasnawi

Publisher:

College of Agriculture, University of Basrah, Iraq

Main Topics:

Gene expression

Journal:

Basrah Journal of Agricultural Sciences Vol.34 Issue 2, pp.60-74

Document Type:

Article

Publication Date:

1/2021

Document Language:

English

Document ID (Org No.):

2001363564

pISSN:

2520-0860

DOI:

10.37077/25200860.2021.34.2.05